Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm12403-201ENSMUST00000121384 959 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm29649-201ENSMUST00000185649 419 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm18473-201ENSMUST00000220543 868 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm10012-201ENSMUST00000078252 192 ntBASIC16.2■□□□□ 0.18
SfswapQ3USH5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SfswapQ3USH5 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.19■□□□□ 0.18
SfswapQ3USH5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Gm13226-201ENSMUST00000117838 404 ntBASIC16.19■□□□□ 0.18
SfswapQ3USH5 Gm6152-201ENSMUST00000151704 340 ntBASIC16.19■□□□□ 0.18
SfswapQ3USH5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.19■□□□□ 0.18
SfswapQ3USH5 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.19■□□□□ 0.18
SfswapQ3USH5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SfswapQ3USH5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Gm12957-201ENSMUST00000117835 377 ntBASIC16.18■□□□□ 0.18
SfswapQ3USH5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Gm11803-201ENSMUST00000119966 444 ntBASIC16.18■□□□□ 0.18
SfswapQ3USH5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.18■□□□□ 0.18
SfswapQ3USH5 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
SfswapQ3USH5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.18■□□□□ 0.18
SfswapQ3USH5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms