Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Gm23270-201ENSMUST00000104055 131 ntBASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Gm20426-201ENSMUST00000173657 440 ntBASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Gm25732-201ENSMUST00000175168 60 ntBASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Gm8546-201ENSMUST00000178288 1264 ntBASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Gm28450-201ENSMUST00000187349 638 ntBASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Gm14267-206ENSMUST00000226870 1209 ntBASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3b2Q3UJB0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Gm14208-201ENSMUST00000119645 678 ntBASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Gm44100-201ENSMUST00000204329 436 ntBASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Gm19963-201ENSMUST00000208413 1255 ntBASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3b2Q3UJB0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Gm43058-201ENSMUST00000197645 625 ntBASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3b2Q3UJB0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms