Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Gm18473-201ENSMUST00000220543 868 ntBASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-3Q3UHX8 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Gm5687-201ENSMUST00000118252 640 ntBASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Gm17794-201ENSMUST00000220252 955 ntBASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-3Q3UHX8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Gm13612-201ENSMUST00000119276 390 ntBASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Gm6152-201ENSMUST00000151704 340 ntBASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-3Q3UHX8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms