Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.83□□□□□ -0.36
Brf2Q3UAW9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.82□□□□□ -0.36
Brf2Q3UAW9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.82□□□□□ -0.36
Brf2Q3UAW9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Brf2Q3UAW9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Rubie-203ENSMUST00000227803 2430 ntBASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Gm15770-201ENSMUST00000117498 584 ntBASIC12.81□□□□□ -0.36
Brf2Q3UAW9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Gm18905-201ENSMUST00000205454 928 ntBASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms