Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Tff1Q08423 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.34□□□□□ -0.59
Tff1Q08423 Gm6888-201ENSMUST00000221983 706 ntBASIC11.34□□□□□ -0.59
Tff1Q08423 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Tff1Q08423 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Tff1Q08423 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.34□□□□□ -0.59
Tff1Q08423 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Tff1Q08423 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tff1Q08423 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Tff1Q08423 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Tff1Q08423 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.33□□□□□ -0.6
Tff1Q08423 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Tff1Q08423 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Tff1Q08423 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.33□□□□□ -0.6
Tff1Q08423 Gm15957-201ENSMUST00000118893 974 ntBASIC11.33□□□□□ -0.6
Tff1Q08423 Gm6222-201ENSMUST00000120787 396 ntBASIC11.33□□□□□ -0.6
Tff1Q08423 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Gm7730-201ENSMUST00000212486 454 ntBASIC11.33□□□□□ -0.6
Tff1Q08423 Gm7653-201ENSMUST00000214567 508 ntBASIC11.33□□□□□ -0.6
Tff1Q08423 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.33□□□□□ -0.6
Tff1Q08423 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Tff1Q08423 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.33□□□□□ -0.6
Tff1Q08423 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Tff1Q08423 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tff1Q08423 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.33□□□□□ -0.6
Tff1Q08423 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.32□□□□□ -0.6
Tff1Q08423 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Tff1Q08423 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Tff1Q08423 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Tff1Q08423 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Tff1Q08423 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.32□□□□□ -0.6
Tff1Q08423 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Gm13015-201ENSMUST00000118674 204 ntBASIC11.32□□□□□ -0.6
Tff1Q08423 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Tff1Q08423 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Tff1Q08423 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.32□□□□□ -0.6
Tff1Q08423 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.32□□□□□ -0.6
Tff1Q08423 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms