Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Pfdn6Q03958 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.69□□□□□ -0.22
Pfdn6Q03958 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Gm13385-201ENSMUST00000121089 220 ntBASIC13.69□□□□□ -0.22
Pfdn6Q03958 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.69□□□□□ -0.22
Pfdn6Q03958 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.69□□□□□ -0.22
Pfdn6Q03958 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Mir497b-201ENSMUST00000093601 125 ntBASIC13.69□□□□□ -0.22
Pfdn6Q03958 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn6Q03958 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.68□□□□□ -0.22
Pfdn6Q03958 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.68□□□□□ -0.22
Pfdn6Q03958 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Gm6912-201ENSMUST00000117218 544 ntBASIC13.68□□□□□ -0.22
Pfdn6Q03958 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Gm44872-201ENSMUST00000207864 420 ntBASIC13.68□□□□□ -0.22
Pfdn6Q03958 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.68□□□□□ -0.22
Pfdn6Q03958 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.68□□□□□ -0.22
Pfdn6Q03958 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.68□□□□□ -0.22
Pfdn6Q03958 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Matn2-206ENSMUST00000228570 2798 ntBASIC13.68□□□□□ -0.22
Pfdn6Q03958 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn6Q03958 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.67□□□□□ -0.22
Pfdn6Q03958 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms