Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.83□□□□□ -0.2
Gabpb1Q00420 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.83□□□□□ -0.2
Gabpb1Q00420 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.83□□□□□ -0.2
Gabpb1Q00420 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Mir7684-201ENSMUST00000183858 60 ntBASIC13.83□□□□□ -0.2
Gabpb1Q00420 Mir8102-201ENSMUST00000184148 139 ntBASIC13.83□□□□□ -0.2
Gabpb1Q00420 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.83□□□□□ -0.2
Gabpb1Q00420 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.83□□□□□ -0.2
Gabpb1Q00420 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Gabpb1Q00420 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.82□□□□□ -0.2
Gabpb1Q00420 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Gabpb1Q00420 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Gm9522-201ENSMUST00000182394 926 ntBASIC13.82□□□□□ -0.2
Gabpb1Q00420 Gm27838-201ENSMUST00000184829 128 ntBASIC13.82□□□□□ -0.2
Gabpb1Q00420 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gabpb1Q00420 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.81□□□□□ -0.2
Gabpb1Q00420 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.81□□□□□ -0.2
Gabpb1Q00420 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms