Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.15□□□□□ -0.46
SgcbP82349 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SgcbP82349 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.15□□□□□ -0.46
SgcbP82349 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.15□□□□□ -0.46
SgcbP82349 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.15□□□□□ -0.46
SgcbP82349 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.15□□□□□ -0.46
SgcbP82349 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.15□□□□□ -0.46
SgcbP82349 Gm23984-201ENSMUST00000157139 203 ntBASIC12.15□□□□□ -0.46
SgcbP82349 Gm18307-201ENSMUST00000206864 949 ntBASIC12.15□□□□□ -0.46
SgcbP82349 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SgcbP82349 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.15□□□□□ -0.46
SgcbP82349 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.15□□□□□ -0.46
SgcbP82349 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SgcbP82349 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.15□□□□□ -0.46
SgcbP82349 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Gm38116-201ENSMUST00000193873 1533 ntBASIC12.15□□□□□ -0.46
SgcbP82349 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcbP82349 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
SgcbP82349 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
SgcbP82349 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SgcbP82349 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SgcbP82349 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.14□□□□□ -0.47
SgcbP82349 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SgcbP82349 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SgcbP82349 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.14□□□□□ -0.47
SgcbP82349 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
SgcbP82349 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SgcbP82349 Gm15770-201ENSMUST00000117498 584 ntBASIC12.14□□□□□ -0.47
SgcbP82349 Gm12485-201ENSMUST00000119641 291 ntBASIC12.14□□□□□ -0.47
SgcbP82349 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.14□□□□□ -0.47
SgcbP82349 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.14□□□□□ -0.47
SgcbP82349 Gm6745-201ENSMUST00000199216 526 ntBASIC12.14□□□□□ -0.47
SgcbP82349 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.14□□□□□ -0.47
SgcbP82349 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.14□□□□□ -0.47
SgcbP82349 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
SgcbP82349 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SgcbP82349 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
SgcbP82349 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
SgcbP82349 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcbP82349 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SgcbP82349 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SgcbP82349 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SgcbP82349 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
SgcbP82349 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms