Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sec61a1P61620 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.02□□□□□ -0.48
Sec61a1P61620 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sec61a1P61620 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sec61a1P61620 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sec61a1P61620 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sec61a1P61620 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sec61a1P61620 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sec61a1P61620 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.48
Sec61a1P61620 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sec61a1P61620 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sec61a1P61620 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sec61a1P61620 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sec61a1P61620 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.02□□□□□ -0.49
Sec61a1P61620 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Gm13223-201ENSMUST00000118609 747 ntBASIC12.02□□□□□ -0.49
Sec61a1P61620 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.02□□□□□ -0.49
Sec61a1P61620 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.02□□□□□ -0.49
Sec61a1P61620 Gm18766-201ENSMUST00000189811 808 ntBASIC12.02□□□□□ -0.49
Sec61a1P61620 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sec61a1P61620 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.02□□□□□ -0.49
Sec61a1P61620 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.02□□□□□ -0.49
Sec61a1P61620 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Sec61a1P61620 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a1P61620 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.02□□□□□ -0.49
Sec61a1P61620 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.01□□□□□ -0.49
Sec61a1P61620 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a1P61620 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.01□□□□□ -0.49
Sec61a1P61620 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sec61a1P61620 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms