Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Grk6-205ENSMUST00000224653 2976 ntBASIC16.65■□□□□ 0.26
Tm6sf1P58749 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.65■□□□□ 0.26
Tm6sf1P58749 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.65■□□□□ 0.26
Tm6sf1P58749 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.65■□□□□ 0.26
Tm6sf1P58749 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Gm18018-201ENSMUST00000198273 408 ntBASIC16.65■□□□□ 0.26
Tm6sf1P58749 Gm6983-201ENSMUST00000214912 628 ntBASIC16.65■□□□□ 0.26
Tm6sf1P58749 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.65■□□□□ 0.26
Tm6sf1P58749 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tm6sf1P58749 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Tm6sf1P58749 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Tm6sf1P58749 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.64■□□□□ 0.26
Tm6sf1P58749 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.64■□□□□ 0.26
Tm6sf1P58749 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.64■□□□□ 0.25
Tm6sf1P58749 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.64■□□□□ 0.25
Tm6sf1P58749 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Gm44397-201ENSMUST00000195950 113 ntBASIC16.64■□□□□ 0.25
Tm6sf1P58749 Gm45841-201ENSMUST00000207700 164 ntBASIC16.64■□□□□ 0.25
Tm6sf1P58749 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Gm6180-201ENSMUST00000065243 498 ntBASIC16.64■□□□□ 0.25
Tm6sf1P58749 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.64■□□□□ 0.25
Tm6sf1P58749 Gm26315-201ENSMUST00000083890 321 ntBASIC16.64■□□□□ 0.25
Tm6sf1P58749 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tm6sf1P58749 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Tm6sf1P58749 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Gm15429-201ENSMUST00000151268 798 ntBASIC16.63■□□□□ 0.25
Tm6sf1P58749 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.63■□□□□ 0.25
Tm6sf1P58749 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.63■□□□□ 0.25
Tm6sf1P58749 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.63■□□□□ 0.25
Tm6sf1P58749 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tm6sf1P58749 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms