Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cldn18P56857 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cldn18P56857 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.19□□□□□ -0.46
Cldn18P56857 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.19□□□□□ -0.46
Cldn18P56857 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.19□□□□□ -0.46
Cldn18P56857 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.19□□□□□ -0.46
Cldn18P56857 Gm12403-201ENSMUST00000121384 959 ntBASIC12.19□□□□□ -0.46
Cldn18P56857 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.19□□□□□ -0.46
Cldn18P56857 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.19□□□□□ -0.46
Cldn18P56857 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.19□□□□□ -0.46
Cldn18P56857 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.19□□□□□ -0.46
Cldn18P56857 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.19□□□□□ -0.46
Cldn18P56857 Mir7654-201ENSMUST00000185082 70 ntBASIC12.19□□□□□ -0.46
Cldn18P56857 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.19□□□□□ -0.46
Cldn18P56857 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.19□□□□□ -0.46
Cldn18P56857 Gm18307-201ENSMUST00000206864 949 ntBASIC12.19□□□□□ -0.46
Cldn18P56857 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.19□□□□□ -0.46
Cldn18P56857 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.19□□□□□ -0.46
Cldn18P56857 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn18P56857 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.18□□□□□ -0.46
Cldn18P56857 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cldn18P56857 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.18□□□□□ -0.46
Cldn18P56857 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cldn18P56857 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Cldn18P56857 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.18□□□□□ -0.46
Cldn18P56857 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.18□□□□□ -0.46
Cldn18P56857 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Gm18018-201ENSMUST00000198273 408 ntBASIC12.18□□□□□ -0.46
Cldn18P56857 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cldn18P56857 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.18□□□□□ -0.46
Cldn18P56857 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cldn18P56857 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.18□□□□□ -0.46
Cldn18P56857 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn18P56857 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cldn18P56857 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cldn18P56857 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cldn18P56857 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.17□□□□□ -0.46
Cldn18P56857 Gm13689-201ENSMUST00000119360 685 ntBASIC12.17□□□□□ -0.46
Cldn18P56857 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Cldn18P56857 Gm14928-201ENSMUST00000120198 477 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms