Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdh11P55288 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.44□□□□□ -0.42
Cdh11P55288 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdh11P55288 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdh11P55288 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Cdh11P55288 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cdh11P55288 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdh11P55288 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Gm27989-201ENSMUST00000184721 107 ntBASIC12.43□□□□□ -0.42
Cdh11P55288 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdh11P55288 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdh11P55288 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.43□□□□□ -0.42
Cdh11P55288 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.43□□□□□ -0.42
Cdh11P55288 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cdh11P55288 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.43□□□□□ -0.42
Cdh11P55288 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh11P55288 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.43□□□□□ -0.42
Cdh11P55288 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.43□□□□□ -0.42
Cdh11P55288 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh11P55288 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cdh11P55288 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Cdh11P55288 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Gm24543-201ENSMUST00000103867 82 ntBASIC12.42□□□□□ -0.42
Cdh11P55288 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdh11P55288 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.42□□□□□ -0.42
Cdh11P55288 Mir7684-201ENSMUST00000183858 60 ntBASIC12.42□□□□□ -0.42
Cdh11P55288 Gm44344-201ENSMUST00000200287 129 ntBASIC12.42□□□□□ -0.42
Cdh11P55288 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.42□□□□□ -0.42
Cdh11P55288 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.42□□□□□ -0.42
Cdh11P55288 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh11P55288 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.41□□□□□ -0.42
Cdh11P55288 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Cdh11P55288 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdh11P55288 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms