Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.28□□□□□ -0.6
Nkx2-1P50220 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.28□□□□□ -0.6
Nkx2-1P50220 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.27□□□□□ -0.6
Nkx2-1P50220 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Nkx2-1P50220 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-1P50220 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Nkx2-1P50220 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Nkx2-1P50220 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.27□□□□□ -0.61
Nkx2-1P50220 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.27□□□□□ -0.61
Nkx2-1P50220 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.27□□□□□ -0.61
Nkx2-1P50220 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-1P50220 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.26□□□□□ -0.61
Nkx2-1P50220 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Gm12260-201ENSMUST00000122447 411 ntBASIC11.26□□□□□ -0.61
Nkx2-1P50220 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Gm29741-201ENSMUST00000192667 421 ntBASIC11.26□□□□□ -0.61
Nkx2-1P50220 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Gm44771-201ENSMUST00000206975 626 ntBASIC11.26□□□□□ -0.61
Nkx2-1P50220 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.26□□□□□ -0.61
Nkx2-1P50220 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-1P50220 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms