Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.32□□□□□ -0.44
Rfx3P48381 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rfx3P48381 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rfx3P48381 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.32□□□□□ -0.44
Rfx3P48381 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.32□□□□□ -0.44
Rfx3P48381 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.32□□□□□ -0.44
Rfx3P48381 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Gm27430-201ENSMUST00000184585 107 ntBASIC12.32□□□□□ -0.44
Rfx3P48381 Gm44333-201ENSMUST00000197168 107 ntBASIC12.32□□□□□ -0.44
Rfx3P48381 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Gm18027-201ENSMUST00000218947 619 ntBASIC12.32□□□□□ -0.44
Rfx3P48381 Gm16476-201ENSMUST00000221544 139 ntBASIC12.32□□□□□ -0.44
Rfx3P48381 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.32□□□□□ -0.44
Rfx3P48381 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rfx3P48381 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.32□□□□□ -0.44
Rfx3P48381 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.32□□□□□ -0.44
Rfx3P48381 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rfx3P48381 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rfx3P48381 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rfx3P48381 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rfx3P48381 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.32□□□□□ -0.44
Rfx3P48381 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.31□□□□□ -0.44
Rfx3P48381 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rfx3P48381 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Rfx3P48381 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rfx3P48381 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.31□□□□□ -0.44
Rfx3P48381 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rfx3P48381 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rfx3P48381 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Gm15693-201ENSMUST00000120470 637 ntBASIC12.31□□□□□ -0.44
Rfx3P48381 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.31□□□□□ -0.44
Rfx3P48381 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.31□□□□□ -0.44
Rfx3P48381 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Rfx3P48381 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rfx3P48381 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.31□□□□□ -0.44
Rfx3P48381 Gm44872-201ENSMUST00000207864 420 ntBASIC12.31□□□□□ -0.44
Rfx3P48381 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rfx3P48381 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.31□□□□□ -0.44
Rfx3P48381 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.31□□□□□ -0.44
Rfx3P48381 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Rfx3P48381 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rfx3P48381 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx3P48381 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rfx3P48381 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Rfx3P48381 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rfx3P48381 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms