Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gli1P47806 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gli1P47806 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gli1P47806 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gli1P47806 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Gli1P47806 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gli1P47806 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Gli1P47806 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.31□□□□□ -0.28
Gli1P47806 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.31□□□□□ -0.28
Gli1P47806 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.31□□□□□ -0.28
Gli1P47806 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.31□□□□□ -0.28
Gli1P47806 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.31□□□□□ -0.28
Gli1P47806 Gm15487-201ENSMUST00000122373 465 ntBASIC13.31□□□□□ -0.28
Gli1P47806 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.31□□□□□ -0.28
Gli1P47806 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
Gli1P47806 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.31□□□□□ -0.28
Gli1P47806 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Gli1P47806 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Gli1P47806 Gm18766-201ENSMUST00000189811 808 ntBASIC13.31□□□□□ -0.28
Gli1P47806 Gm9063-201ENSMUST00000223299 582 ntBASIC13.31□□□□□ -0.28
Gli1P47806 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.31□□□□□ -0.28
Gli1P47806 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Gli1P47806 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.31□□□□□ -0.28
Gli1P47806 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gli1P47806 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.31□□□□□ -0.28
Gli1P47806 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Gli1P47806 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.3□□□□□ -0.28
Gli1P47806 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.3□□□□□ -0.28
Gli1P47806 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.3□□□□□ -0.28
Gli1P47806 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gli1P47806 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.3□□□□□ -0.28
Gli1P47806 Gm14719-201ENSMUST00000121891 340 ntBASIC13.3□□□□□ -0.28
Gli1P47806 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gli1P47806 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.3□□□□□ -0.28
Gli1P47806 Gm9794-201ENSMUST00000202370 423 ntBASIC13.3□□□□□ -0.28
Gli1P47806 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gli1P47806 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Syt7-204ENSMUST00000223586 1344 ntBASIC13.3□□□□□ -0.28
Gli1P47806 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gli1P47806 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.3□□□□□ -0.28
Gli1P47806 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gli1P47806 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gli1P47806 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gli1P47806 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gli1P47806 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gli1P47806 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gli1P47806 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gli1P47806 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gli1P47806 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.29□□□□□ -0.28
Gli1P47806 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.29□□□□□ -0.28
Gli1P47806 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gli1P47806 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.29□□□□□ -0.28
Gli1P47806 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gli1P47806 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gli1P47806 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Gli1P47806 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.29□□□□□ -0.28
Gli1P47806 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms