Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.06□□□□□ -0.32
Cdh4P39038 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Cdh4P39038 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.05□□□□□ -0.32
Cdh4P39038 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cdh4P39038 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cdh4P39038 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Cdh4P39038 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.05□□□□□ -0.32
Cdh4P39038 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.05□□□□□ -0.32
Cdh4P39038 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.05□□□□□ -0.32
Cdh4P39038 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cdh4P39038 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Cdh4P39038 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cdh4P39038 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Cdh4P39038 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh4P39038 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdh4P39038 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdh4P39038 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.04□□□□□ -0.32
Cdh4P39038 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.04□□□□□ -0.32
Cdh4P39038 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.04□□□□□ -0.32
Cdh4P39038 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.04□□□□□ -0.32
Cdh4P39038 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Cdh4P39038 Gm15823-201ENSMUST00000064305 670 ntBASIC13.04□□□□□ -0.32
Cdh4P39038 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdh4P39038 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cdh4P39038 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cdh4P39038 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdh4P39038 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdh4P39038 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh4P39038 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdh4P39038 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.04□□□□□ -0.32
Cdh4P39038 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.03□□□□□ -0.32
Cdh4P39038 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh4P39038 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.03□□□□□ -0.32
Cdh4P39038 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdh4P39038 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.03□□□□□ -0.32
Cdh4P39038 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.03□□□□□ -0.32
Cdh4P39038 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh4P39038 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Gm43094-201ENSMUST00000196549 921 ntBASIC13.03□□□□□ -0.32
Cdh4P39038 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh4P39038 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.03□□□□□ -0.32
Cdh4P39038 Gm18624-201ENSMUST00000220966 658 ntBASIC13.03□□□□□ -0.32
Cdh4P39038 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.03□□□□□ -0.32
Cdh4P39038 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms