Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.58□□□□□ -0.24
LdlrP35951 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
LdlrP35951 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
LdlrP35951 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.58□□□□□ -0.24
LdlrP35951 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.58□□□□□ -0.24
LdlrP35951 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.57□□□□□ -0.24
LdlrP35951 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
LdlrP35951 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LdlrP35951 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LdlrP35951 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.57□□□□□ -0.24
LdlrP35951 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
LdlrP35951 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LdlrP35951 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.57□□□□□ -0.24
LdlrP35951 Gm14719-201ENSMUST00000121891 340 ntBASIC13.57□□□□□ -0.24
LdlrP35951 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.57□□□□□ -0.24
LdlrP35951 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.57□□□□□ -0.24
LdlrP35951 Gm44719-201ENSMUST00000206404 149 ntBASIC13.57□□□□□ -0.24
LdlrP35951 Gm18049-201ENSMUST00000208909 581 ntBASIC13.57□□□□□ -0.24
LdlrP35951 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LdlrP35951 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.57□□□□□ -0.24
LdlrP35951 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.57□□□□□ -0.24
LdlrP35951 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LdlrP35951 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.56□□□□□ -0.24
LdlrP35951 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LdlrP35951 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LdlrP35951 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LdlrP35951 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LdlrP35951 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
LdlrP35951 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LdlrP35951 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.56□□□□□ -0.24
LdlrP35951 Gm13015-201ENSMUST00000118674 204 ntBASIC13.56□□□□□ -0.24
LdlrP35951 Gm6222-201ENSMUST00000120787 396 ntBASIC13.56□□□□□ -0.24
LdlrP35951 Gm14767-201ENSMUST00000121559 586 ntBASIC13.56□□□□□ -0.24
LdlrP35951 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.56□□□□□ -0.24
LdlrP35951 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.56□□□□□ -0.24
LdlrP35951 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.56□□□□□ -0.24
LdlrP35951 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LdlrP35951 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.56□□□□□ -0.24
LdlrP35951 Gm18027-201ENSMUST00000218947 619 ntBASIC13.56□□□□□ -0.24
LdlrP35951 Gm9063-201ENSMUST00000223299 582 ntBASIC13.56□□□□□ -0.24
LdlrP35951 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LdlrP35951 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LdlrP35951 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LdlrP35951 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
LdlrP35951 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LdlrP35951 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms