Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Slc6a1P31648 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Slc6a1P31648 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Slc6a1P31648 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Slc6a1P31648 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Slc6a1P31648 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Slc6a1P31648 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.72□□□□□ -0.53
Slc6a1P31648 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Slc6a1P31648 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.72□□□□□ -0.53
Slc6a1P31648 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Slc6a1P31648 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Slc6a1P31648 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Slc6a1P31648 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.72□□□□□ -0.53
Slc6a1P31648 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.72□□□□□ -0.53
Slc6a1P31648 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Slc6a1P31648 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.72□□□□□ -0.53
Slc6a1P31648 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.72□□□□□ -0.53
Slc6a1P31648 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.72□□□□□ -0.53
Slc6a1P31648 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.72□□□□□ -0.53
Slc6a1P31648 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a1P31648 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Slc6a1P31648 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Slc6a1P31648 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a1P31648 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a1P31648 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Slc6a1P31648 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a1P31648 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.71□□□□□ -0.53
Slc6a1P31648 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Slc6a1P31648 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Slc6a1P31648 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.71□□□□□ -0.53
Slc6a1P31648 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Slc6a1P31648 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a1P31648 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a1P31648 Gm23935-201ENSMUST00000102303 57 ntBASIC11.71□□□□□ -0.53
Slc6a1P31648 Gm24270-201ENSMUST00000102326 57 ntBASIC11.71□□□□□ -0.53
Slc6a1P31648 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.71□□□□□ -0.53
Slc6a1P31648 Gm24245-201ENSMUST00000157318 57 ntBASIC11.71□□□□□ -0.53
Slc6a1P31648 Gm25911-201ENSMUST00000157621 56 ntBASIC11.71□□□□□ -0.53
Slc6a1P31648 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Slc6a1P31648 Gm10275-202ENSMUST00000168697 495 ntBASIC11.71□□□□□ -0.53
Slc6a1P31648 Gm45747-201ENSMUST00000212203 999 ntBASIC11.71□□□□□ -0.53
Slc6a1P31648 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a1P31648 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a1P31648 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a1P31648 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a1P31648 Gm10275-201ENSMUST00000092620 635 ntBASIC11.71□□□□□ -0.53
Slc6a1P31648 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Slc6a1P31648 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a1P31648 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Slc6a1P31648 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a1P31648 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a1P31648 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a1P31648 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Slc6a1P31648 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Slc6a1P31648 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a1P31648 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.71□□□□□ -0.54
Slc6a1P31648 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a1P31648 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Slc6a1P31648 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Slc6a1P31648 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.7□□□□□ -0.54
Slc6a1P31648 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Slc6a1P31648 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Slc6a1P31648 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms