Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nedd8P29595 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nedd8P29595 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 AA414768-201ENSMUST00000121924 1257 ntBASIC12.54□□□□□ -0.4
Nedd8P29595 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Gm16026-204ENSMUST00000162652 683 ntBASIC12.54□□□□□ -0.4
Nedd8P29595 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.54□□□□□ -0.4
Nedd8P29595 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nedd8P29595 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nedd8P29595 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.54□□□□□ -0.4
Nedd8P29595 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.54□□□□□ -0.4
Nedd8P29595 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.54□□□□□ -0.4
Nedd8P29595 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nedd8P29595 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.54□□□□□ -0.4
Nedd8P29595 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.54□□□□□ -0.4
Nedd8P29595 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nedd8P29595 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nedd8P29595 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.53□□□□□ -0.4
Nedd8P29595 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.53□□□□□ -0.4
Nedd8P29595 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nedd8P29595 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.53□□□□□ -0.4
Nedd8P29595 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Gm12882-201ENSMUST00000121696 517 ntBASIC12.53□□□□□ -0.4
Nedd8P29595 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Nedd8P29595 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.53□□□□□ -0.4
Nedd8P29595 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.53□□□□□ -0.4
Nedd8P29595 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nedd8P29595 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.53□□□□□ -0.4
Nedd8P29595 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Nedd8P29595 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.53□□□□□ -0.4
Nedd8P29595 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.53□□□□□ -0.4
Nedd8P29595 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Nedd8P29595 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Nedd8P29595 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.53□□□□□ -0.4
Nedd8P29595 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.53□□□□□ -0.4
Nedd8P29595 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nedd8P29595 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nedd8P29595 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nedd8P29595 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nedd8P29595 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nedd8P29595 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nedd8P29595 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nedd8P29595 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nedd8P29595 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nedd8P29595 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nedd8P29595 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nedd8P29595 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Nedd8P29595 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms