Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cd40P27512 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.31□□□□□ -0.44
Cd40P27512 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.31□□□□□ -0.44
Cd40P27512 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Cd40P27512 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.31□□□□□ -0.44
Cd40P27512 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.31□□□□□ -0.44
Cd40P27512 Gm38144-201ENSMUST00000192790 465 ntBASIC12.31□□□□□ -0.44
Cd40P27512 Gm37917-201ENSMUST00000194711 392 ntBASIC12.31□□□□□ -0.44
Cd40P27512 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.31□□□□□ -0.44
Cd40P27512 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.31□□□□□ -0.44
Cd40P27512 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.31□□□□□ -0.44
Cd40P27512 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.31□□□□□ -0.44
Cd40P27512 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.31□□□□□ -0.44
Cd40P27512 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Cd40P27512 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cd40P27512 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.31□□□□□ -0.44
Cd40P27512 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.31□□□□□ -0.44
Cd40P27512 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.31□□□□□ -0.44
Cd40P27512 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Cd40P27512 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Cd40P27512 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cd40P27512 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.3□□□□□ -0.44
Cd40P27512 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cd40P27512 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cd40P27512 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.3□□□□□ -0.44
Cd40P27512 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.3□□□□□ -0.44
Cd40P27512 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cd40P27512 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.3□□□□□ -0.44
Cd40P27512 Gm12341-201ENSMUST00000119724 503 ntBASIC12.3□□□□□ -0.44
Cd40P27512 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.3□□□□□ -0.44
Cd40P27512 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.3□□□□□ -0.44
Cd40P27512 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.3□□□□□ -0.44
Cd40P27512 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cd40P27512 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cd40P27512 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.3□□□□□ -0.44
Cd40P27512 Gm18624-201ENSMUST00000220966 658 ntBASIC12.3□□□□□ -0.44
Cd40P27512 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.3□□□□□ -0.44
Cd40P27512 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Cd40P27512 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.3□□□□□ -0.44
Cd40P27512 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cd40P27512 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40P27512 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd40P27512 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd40P27512 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cd40P27512 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd40P27512 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.29□□□□□ -0.44
Cd40P27512 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.29□□□□□ -0.44
Cd40P27512 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd40P27512 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms