Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.24□□□□□ -0.45
Cd48P18181 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.24□□□□□ -0.45
Cd48P18181 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cd48P18181 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.24□□□□□ -0.45
Cd48P18181 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cd48P18181 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cd48P18181 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.24□□□□□ -0.45
Cd48P18181 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.24□□□□□ -0.45
Cd48P18181 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.24□□□□□ -0.45
Cd48P18181 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.24□□□□□ -0.45
Cd48P18181 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.24□□□□□ -0.45
Cd48P18181 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Cd48P18181 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cd48P18181 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cd48P18181 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cd48P18181 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cd48P18181 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Cd48P18181 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd48P18181 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cd48P18181 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cd48P18181 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.23□□□□□ -0.45
Cd48P18181 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cd48P18181 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Gm24543-201ENSMUST00000103867 82 ntBASIC12.23□□□□□ -0.45
Cd48P18181 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Cd48P18181 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Cd48P18181 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Gm33320-201ENSMUST00000192232 530 ntBASIC12.23□□□□□ -0.45
Cd48P18181 Gm16476-201ENSMUST00000221544 139 ntBASIC12.23□□□□□ -0.45
Cd48P18181 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.23□□□□□ -0.45
Cd48P18181 Dupd1-202ENSMUST00000224735 548 ntBASIC12.23□□□□□ -0.45
Cd48P18181 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.23□□□□□ -0.45
Cd48P18181 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.23□□□□□ -0.45
Cd48P18181 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cd48P18181 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cd48P18181 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Cd48P18181 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cd48P18181 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd48P18181 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cd48P18181 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd48P18181 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd48P18181 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd48P18181 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Cd48P18181 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Cd48P18181 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd48P18181 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.22□□□□□ -0.45
Cd48P18181 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd48P18181 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd48P18181 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd48P18181 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd48P18181 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.22□□□□□ -0.45
Cd48P18181 Mir698-201ENSMUST00000102164 109 ntBASIC12.22□□□□□ -0.45
Cd48P18181 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd48P18181 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd48P18181 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.22□□□□□ -0.45
Cd48P18181 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.22□□□□□ -0.45
Cd48P18181 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd48P18181 Gm5425-201ENSMUST00000214125 459 ntBASIC12.22□□□□□ -0.45
Cd48P18181 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.22□□□□□ -0.45
Cd48P18181 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd48P18181 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms