Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hoxc9P09633 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.53■□□□□ 0.4
Hoxc9P09633 Gm3756-201ENSMUST00000169182 1355 ntBASIC17.53■□□□□ 0.4
Hoxc9P09633 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.53■□□□□ 0.4
Hoxc9P09633 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc9P09633 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hoxc9P09633 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc9P09633 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc9P09633 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc9P09633 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Hoxc9P09633 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc9P09633 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc9P09633 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Hoxc9P09633 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc9P09633 Gm28693-202ENSMUST00000190758 331 ntBASIC17.52■□□□□ 0.4
Hoxc9P09633 Gm6621-201ENSMUST00000193251 772 ntBASIC17.52■□□□□ 0.4
Hoxc9P09633 Gm19163-201ENSMUST00000223313 780 ntBASIC17.52■□□□□ 0.4
Hoxc9P09633 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc9P09633 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc9P09633 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc9P09633 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxc9P09633 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Hoxc9P09633 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxc9P09633 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Hoxc9P09633 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxc9P09633 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.52■□□□□ 0.39
Hoxc9P09633 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxc9P09633 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxc9P09633 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc9P09633 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc9P09633 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc9P09633 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc9P09633 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc9P09633 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc9P09633 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc9P09633 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc9P09633 Gm15370-201ENSMUST00000117158 253 ntBASIC17.51■□□□□ 0.39
Hoxc9P09633 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc9P09633 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hoxc9P09633 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.51■□□□□ 0.39
Hoxc9P09633 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC17.51■□□□□ 0.39
Hoxc9P09633 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Hoxc9P09633 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.51■□□□□ 0.39
Hoxc9P09633 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc9P09633 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc9P09633 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Hoxc9P09633 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc9P09633 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Hoxc9P09633 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Hoxc9P09633 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hoxc9P09633 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Hoxc9P09633 Gm13297-201ENSMUST00000120205 934 ntBASIC17.5■□□□□ 0.39
Hoxc9P09633 Gm2991-201ENSMUST00000173338 480 ntBASIC17.5■□□□□ 0.39
Hoxc9P09633 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Gm5896-201ENSMUST00000189662 1024 ntBASIC17.5■□□□□ 0.39
Hoxc9P09633 Gm7046-201ENSMUST00000221351 977 ntBASIC17.5■□□□□ 0.39
Hoxc9P09633 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.5■□□□□ 0.39
Hoxc9P09633 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.5■□□□□ 0.39
Hoxc9P09633 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc9P09633 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hoxc9P09633 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hoxc9P09633 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hoxc9P09633 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hoxc9P09633 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hoxc9P09633 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hoxc9P09633 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms