Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ApoeP08226 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ApoeP08226 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ApoeP08226 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ApoeP08226 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
ApoeP08226 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.88□□□□□ -0.35
ApoeP08226 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.88□□□□□ -0.35
ApoeP08226 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ApoeP08226 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.88□□□□□ -0.35
ApoeP08226 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.88□□□□□ -0.35
ApoeP08226 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ApoeP08226 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.88□□□□□ -0.35
ApoeP08226 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ApoeP08226 Mir125a-201ENSMUST00000083545 68 ntBASIC12.88□□□□□ -0.35
ApoeP08226 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.88□□□□□ -0.35
ApoeP08226 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ApoeP08226 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ApoeP08226 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ApoeP08226 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.88□□□□□ -0.35
ApoeP08226 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
ApoeP08226 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ApoeP08226 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.87□□□□□ -0.35
ApoeP08226 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ApoeP08226 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
ApoeP08226 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ApoeP08226 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ApoeP08226 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ApoeP08226 Gm11025-201ENSMUST00000140773 466 ntBASIC12.87□□□□□ -0.35
ApoeP08226 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.87□□□□□ -0.35
ApoeP08226 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Gm18057-201ENSMUST00000208220 503 ntBASIC12.87□□□□□ -0.35
ApoeP08226 Psmb5-202ENSMUST00000227257 622 ntBASIC12.87□□□□□ -0.35
ApoeP08226 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ApoeP08226 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Mir497b-201ENSMUST00000093601 125 ntBASIC12.87□□□□□ -0.35
ApoeP08226 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
ApoeP08226 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ApoeP08226 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ApoeP08226 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.87□□□□□ -0.35
ApoeP08226 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ApoeP08226 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.87□□□□□ -0.35
ApoeP08226 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ApoeP08226 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ApoeP08226 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ApoeP08226 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ApoeP08226 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ApoeP08226 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ApoeP08226 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ApoeP08226 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ApoeP08226 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ApoeP08226 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ApoeP08226 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ApoeP08226 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ApoeP08226 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms