Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
P06344 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
P06344 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Gm12485-201ENSMUST00000119641 291 ntBASIC12.13□□□□□ -0.47
P06344 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.13□□□□□ -0.47
P06344 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.13□□□□□ -0.47
P06344 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.13□□□□□ -0.47
P06344 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.13□□□□□ -0.47
P06344 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.13□□□□□ -0.47
P06344 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
P06344 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06344 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.12□□□□□ -0.47
P06344 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
P06344 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
P06344 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.12□□□□□ -0.47
P06344 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.12□□□□□ -0.47
P06344 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.12□□□□□ -0.47
P06344 Gm28911-201ENSMUST00000188837 117 ntBASIC12.12□□□□□ -0.47
P06344 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
P06344 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.12□□□□□ -0.47
P06344 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
P06344 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.12□□□□□ -0.47
P06344 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.12□□□□□ -0.47
P06344 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06344 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
P06344 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
P06344 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.11□□□□□ -0.47
P06344 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
P06344 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P06344 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P06344 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P06344 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.11□□□□□ -0.47
P06344 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.11□□□□□ -0.47
P06344 Gm11478-201ENSMUST00000117851 599 ntBASIC12.11□□□□□ -0.47
P06344 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.11□□□□□ -0.47
P06344 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.11□□□□□ -0.47
P06344 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.11□□□□□ -0.47
P06344 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.11□□□□□ -0.47
P06344 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms