Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PdgfrbP05622 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PdgfrbP05622 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PdgfrbP05622 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PdgfrbP05622 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
PdgfrbP05622 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PdgfrbP05622 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PdgfrbP05622 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
PdgfrbP05622 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.78□□□□□ -0.2
PdgfrbP05622 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.78□□□□□ -0.2
PdgfrbP05622 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.78□□□□□ -0.2
PdgfrbP05622 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Gm10576-201ENSMUST00000191927 825 ntBASIC13.78□□□□□ -0.2
PdgfrbP05622 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PdgfrbP05622 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.78□□□□□ -0.2
PdgfrbP05622 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.78□□□□□ -0.2
PdgfrbP05622 Gm9797-201ENSMUST00000052902 613 ntBASIC13.78□□□□□ -0.2
PdgfrbP05622 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PdgfrbP05622 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.78□□□□□ -0.2
PdgfrbP05622 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.78□□□□□ -0.2
PdgfrbP05622 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdgfrbP05622 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PdgfrbP05622 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PdgfrbP05622 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PdgfrbP05622 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
PdgfrbP05622 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PdgfrbP05622 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PdgfrbP05622 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
PdgfrbP05622 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.77□□□□□ -0.21
PdgfrbP05622 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.77□□□□□ -0.21
PdgfrbP05622 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
PdgfrbP05622 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.77□□□□□ -0.21
PdgfrbP05622 Gm16215-201ENSMUST00000161990 637 ntBASIC13.77□□□□□ -0.21
PdgfrbP05622 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.77□□□□□ -0.21
PdgfrbP05622 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.77□□□□□ -0.21
PdgfrbP05622 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.77□□□□□ -0.21
PdgfrbP05622 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.77□□□□□ -0.21
PdgfrbP05622 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.77□□□□□ -0.21
PdgfrbP05622 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.77□□□□□ -0.21
PdgfrbP05622 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.77□□□□□ -0.21
PdgfrbP05622 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
PdgfrbP05622 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PdgfrbP05622 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.77□□□□□ -0.21
PdgfrbP05622 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.77□□□□□ -0.21
PdgfrbP05622 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
PdgfrbP05622 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdgfrbP05622 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdgfrbP05622 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdgfrbP05622 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
PdgfrbP05622 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PdgfrbP05622 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdgfrbP05622 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdgfrbP05622 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdgfrbP05622 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PdgfrbP05622 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdgfrbP05622 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.76□□□□□ -0.21
PdgfrbP05622 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdgfrbP05622 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PdgfrbP05622 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.76□□□□□ -0.21
PdgfrbP05622 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdgfrbP05622 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
PdgfrbP05622 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.76□□□□□ -0.21
PdgfrbP05622 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.76□□□□□ -0.21
PdgfrbP05622 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.76□□□□□ -0.21
PdgfrbP05622 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdgfrbP05622 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdgfrbP05622 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.76□□□□□ -0.21
PdgfrbP05622 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms