Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P04224 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P04224 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
P04224 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P04224 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
P04224 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.96□□□□□ -0.5
P04224 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
P04224 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P04224 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
P04224 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.96□□□□□ -0.5
P04224 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.96□□□□□ -0.5
P04224 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
P04224 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P04224 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.96□□□□□ -0.5
P04224 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.96□□□□□ -0.5
P04224 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
P04224 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
P04224 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
P04224 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
P04224 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.95□□□□□ -0.5
P04224 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
P04224 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.95□□□□□ -0.5
P04224 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
P04224 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.95□□□□□ -0.5
P04224 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.95□□□□□ -0.5
P04224 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.95□□□□□ -0.5
P04224 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Gm10819-201ENSMUST00000099988 561 ntBASIC11.95□□□□□ -0.5
P04224 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
P04224 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.95□□□□□ -0.5
P04224 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.95□□□□□ -0.5
P04224 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.95□□□□□ -0.5
P04224 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04224 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.94□□□□□ -0.5
P04224 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.94□□□□□ -0.5
P04224 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
P04224 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.94□□□□□ -0.5
P04224 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.94□□□□□ -0.5
P04224 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.94□□□□□ -0.5
P04224 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.94□□□□□ -0.5
P04224 Gm37230-201ENSMUST00000194491 818 ntBASIC11.94□□□□□ -0.5
P04224 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.94□□□□□ -0.5
P04224 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.94□□□□□ -0.5
P04224 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
P04224 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04224 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
P04224 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms