Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Igh-VJ558P01758 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igh-VJ558P01758 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igh-VJ558P01758 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igh-VJ558P01758 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.77□□□□□ -0.52
Igh-VJ558P01758 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igh-VJ558P01758 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Igh-VJ558P01758 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igh-VJ558P01758 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Igh-VJ558P01758 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.77□□□□□ -0.52
Igh-VJ558P01758 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igh-VJ558P01758 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Mir7023-201ENSMUST00000185093 64 ntBASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Gm9797-201ENSMUST00000052902 613 ntBASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igh-VJ558P01758 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm22189-201ENSMUST00000103822 86 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm12403-201ENSMUST00000121384 959 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm5279-201ENSMUST00000199575 745 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms