Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.36□□□□□ -0.27
ClppO88696 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.36□□□□□ -0.27
ClppO88696 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ClppO88696 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.36□□□□□ -0.27
ClppO88696 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ClppO88696 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.35□□□□□ -0.27
ClppO88696 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ClppO88696 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ClppO88696 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ClppO88696 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
ClppO88696 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.35□□□□□ -0.27
ClppO88696 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ClppO88696 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ClppO88696 Mir6392-201ENSMUST00000184924 108 ntBASIC13.35□□□□□ -0.27
ClppO88696 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ClppO88696 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ClppO88696 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ClppO88696 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ClppO88696 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ClppO88696 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ClppO88696 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClppO88696 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.34□□□□□ -0.27
ClppO88696 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
ClppO88696 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.34□□□□□ -0.27
ClppO88696 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.34□□□□□ -0.27
ClppO88696 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ClppO88696 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.34□□□□□ -0.27
ClppO88696 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.34□□□□□ -0.27
ClppO88696 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.34□□□□□ -0.27
ClppO88696 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Gm9908-201ENSMUST00000211534 448 ntBASIC13.34□□□□□ -0.27
ClppO88696 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.34□□□□□ -0.27
ClppO88696 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.34□□□□□ -0.27
ClppO88696 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ClppO88696 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
ClppO88696 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.34□□□□□ -0.27
ClppO88696 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.34□□□□□ -0.27
ClppO88696 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ClppO88696 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClppO88696 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.27
ClppO88696 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
ClppO88696 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
ClppO88696 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
ClppO88696 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms