Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Gm28760-201ENSMUST00000185995 736 ntBASIC13.73□□□□□ -0.21
Dnmt3aO88508 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.73□□□□□ -0.21
Dnmt3aO88508 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.73□□□□□ -0.21
Dnmt3aO88508 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.73□□□□□ -0.21
Dnmt3aO88508 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dnmt3aO88508 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Gm2445-201ENSMUST00000182798 989 ntBASIC13.72□□□□□ -0.21
Dnmt3aO88508 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Gm42612-201ENSMUST00000197986 623 ntBASIC13.72□□□□□ -0.21
Dnmt3aO88508 Gm43170-201ENSMUST00000199827 612 ntBASIC13.72□□□□□ -0.21
Dnmt3aO88508 Gm17795-201ENSMUST00000214505 757 ntBASIC13.72□□□□□ -0.21
Dnmt3aO88508 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.72□□□□□ -0.21
Dnmt3aO88508 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dnmt3aO88508 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.72□□□□□ -0.21
Dnmt3aO88508 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.71□□□□□ -0.21
Dnmt3aO88508 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Gm7488-201ENSMUST00000117148 684 ntBASIC13.71□□□□□ -0.21
Dnmt3aO88508 Gm15240-201ENSMUST00000118156 720 ntBASIC13.71□□□□□ -0.21
Dnmt3aO88508 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Gm24420-201ENSMUST00000176676 59 ntBASIC13.71□□□□□ -0.21
Dnmt3aO88508 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Gm18905-201ENSMUST00000205454 928 ntBASIC13.71□□□□□ -0.21
Dnmt3aO88508 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.71□□□□□ -0.21
Dnmt3aO88508 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.71□□□□□ -0.21
Dnmt3aO88508 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dnmt3aO88508 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dnmt3aO88508 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dnmt3aO88508 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.71□□□□□ -0.22
Dnmt3aO88508 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Dnmt3aO88508 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dnmt3aO88508 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dnmt3aO88508 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms