Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Gm8410-201ENSMUST00000117225 605 ntBASIC13.01□□□□□ -0.33
Vti1bO88384 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.01□□□□□ -0.33
Vti1bO88384 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Gm27622-201ENSMUST00000183779 60 ntBASIC13.01□□□□□ -0.33
Vti1bO88384 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Vti1bO88384 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.01□□□□□ -0.33
Vti1bO88384 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.01□□□□□ -0.33
Vti1bO88384 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.01□□□□□ -0.33
Vti1bO88384 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.01□□□□□ -0.33
Vti1bO88384 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vti1bO88384 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vti1bO88384 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vti1bO88384 BC001981-202ENSMUST00000191393 1545 ntBASIC13.01□□□□□ -0.33
Vti1bO88384 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.01□□□□□ -0.33
Vti1bO88384 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.01□□□□□ -0.33
Vti1bO88384 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1bO88384 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Gm14752-201ENSMUST00000120719 2075 ntBASIC13□□□□□ -0.33
Vti1bO88384 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Gm10729-202ENSMUST00000193403 1375 ntBASIC13□□□□□ -0.33
Vti1bO88384 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13□□□□□ -0.33
Vti1bO88384 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Vti1bO88384 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vti1bO88384 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1bO88384 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vti1bO88384 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vti1bO88384 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Vti1bO88384 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.99□□□□□ -0.33
Vti1bO88384 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vti1bO88384 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vti1bO88384 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Vti1bO88384 Gm24543-201ENSMUST00000103867 82 ntBASIC12.99□□□□□ -0.33
Vti1bO88384 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.99□□□□□ -0.33
Vti1bO88384 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Vti1bO88384 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.99□□□□□ -0.33
Vti1bO88384 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Gm25144-201ENSMUST00000179561 110 ntBASIC12.99□□□□□ -0.33
Vti1bO88384 Gm25352-201ENSMUST00000179815 110 ntBASIC12.99□□□□□ -0.33
Vti1bO88384 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.99□□□□□ -0.33
Vti1bO88384 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.99□□□□□ -0.33
Vti1bO88384 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vti1bO88384 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.99□□□□□ -0.33
Vti1bO88384 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Vti1bO88384 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vti1bO88384 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Vti1bO88384 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.99□□□□□ -0.33
Vti1bO88384 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1bO88384 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Vti1bO88384 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms