Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm26110-201ENSMUST00000083971 165 ntBASIC17.33■□□□□ 0.36
Ubr1O70481 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr1O70481 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr1O70481 AC167669.2-201ENSMUST00000224417 1620 ntBASIC17.33■□□□□ 0.36
Ubr1O70481 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ubr1O70481 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ubr1O70481 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ubr1O70481 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ubr1O70481 Gm12997-201ENSMUST00000120207 640 ntBASIC17.32■□□□□ 0.36
Ubr1O70481 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Gm9061-201ENSMUST00000182707 1006 ntBASIC17.32■□□□□ 0.36
Ubr1O70481 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC17.32■□□□□ 0.36
Ubr1O70481 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC17.32■□□□□ 0.36
Ubr1O70481 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC17.32■□□□□ 0.36
Ubr1O70481 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.32■□□□□ 0.36
Ubr1O70481 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr1O70481 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Ubr1O70481 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Ubr1O70481 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.31■□□□□ 0.36
Ubr1O70481 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ubr1O70481 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC17.31■□□□□ 0.36
Ubr1O70481 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.31■□□□□ 0.36
Ubr1O70481 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Gm38157-201ENSMUST00000194178 1698 ntBASIC17.31■□□□□ 0.36
Ubr1O70481 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Ubr1O70481 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr1O70481 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Gm12291-201ENSMUST00000121627 311 ntBASIC17.3■□□□□ 0.36
Ubr1O70481 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ubr1O70481 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC17.3■□□□□ 0.36
Ubr1O70481 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC17.3■□□□□ 0.36
Ubr1O70481 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ubr1O70481 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Gm4366-201ENSMUST00000201488 1342 ntBASIC17.3■□□□□ 0.36
Ubr1O70481 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.3■□□□□ 0.36
Ubr1O70481 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Ubr1O70481 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.3■□□□□ 0.36
Ubr1O70481 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Gm13875-201ENSMUST00000120162 282 ntBASIC17.3■□□□□ 0.36
Ubr1O70481 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC17.3■□□□□ 0.36
Ubr1O70481 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ubr1O70481 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC17.3■□□□□ 0.36
Ubr1O70481 Gm38317-201ENSMUST00000195564 343 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms