Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.66□□□□□ -0.38
BckdkO55028 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
BckdkO55028 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
BckdkO55028 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
BckdkO55028 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
BckdkO55028 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
BckdkO55028 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.65□□□□□ -0.38
BckdkO55028 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.65□□□□□ -0.38
BckdkO55028 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Gm21854-201ENSMUST00000179901 471 ntBASIC12.65□□□□□ -0.38
BckdkO55028 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.65□□□□□ -0.38
BckdkO55028 Gm42612-201ENSMUST00000197986 623 ntBASIC12.65□□□□□ -0.38
BckdkO55028 Gm43170-201ENSMUST00000199827 612 ntBASIC12.65□□□□□ -0.38
BckdkO55028 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.65□□□□□ -0.38
BckdkO55028 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.65□□□□□ -0.38
BckdkO55028 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
BckdkO55028 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
BckdkO55028 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BckdkO55028 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
BckdkO55028 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
BckdkO55028 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
BckdkO55028 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
BckdkO55028 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
BckdkO55028 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
BckdkO55028 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.64□□□□□ -0.39
BckdkO55028 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
BckdkO55028 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
BckdkO55028 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
BckdkO55028 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.64□□□□□ -0.39
BckdkO55028 Gm15957-201ENSMUST00000118893 974 ntBASIC12.64□□□□□ -0.39
BckdkO55028 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.64□□□□□ -0.39
BckdkO55028 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.64□□□□□ -0.39
BckdkO55028 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.64□□□□□ -0.39
BckdkO55028 Gm18018-201ENSMUST00000198273 408 ntBASIC12.64□□□□□ -0.39
BckdkO55028 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.64□□□□□ -0.39
BckdkO55028 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.64□□□□□ -0.39
BckdkO55028 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.64□□□□□ -0.39
BckdkO55028 Gm7653-201ENSMUST00000214567 508 ntBASIC12.64□□□□□ -0.39
BckdkO55028 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
BckdkO55028 Gm15823-201ENSMUST00000064305 670 ntBASIC12.64□□□□□ -0.39
BckdkO55028 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
BckdkO55028 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
BckdkO55028 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.64□□□□□ -0.39
BckdkO55028 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.64□□□□□ -0.39
BckdkO55028 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
BckdkO55028 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BckdkO55028 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
BckdkO55028 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.63□□□□□ -0.39
BckdkO55028 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms