Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf2O35218 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf2O35218 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf2O35218 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf2O35218 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.59□□□□□ -0.07
Cpsf2O35218 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.59□□□□□ -0.07
Cpsf2O35218 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Gm10253-201ENSMUST00000194270 940 ntBASIC14.59□□□□□ -0.07
Cpsf2O35218 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.59□□□□□ -0.07
Cpsf2O35218 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.59□□□□□ -0.07
Cpsf2O35218 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf2O35218 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf2O35218 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf2O35218 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.59□□□□□ -0.07
Cpsf2O35218 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf2O35218 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf2O35218 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf2O35218 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf2O35218 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf2O35218 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf2O35218 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.58□□□□□ -0.07
Cpsf2O35218 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf2O35218 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf2O35218 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cpsf2O35218 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.58□□□□□ -0.08
Cpsf2O35218 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf2O35218 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf2O35218 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf2O35218 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cpsf2O35218 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.58□□□□□ -0.08
Cpsf2O35218 Gm8410-201ENSMUST00000117225 605 ntBASIC14.58□□□□□ -0.08
Cpsf2O35218 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf2O35218 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.58□□□□□ -0.08
Cpsf2O35218 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf2O35218 Gm28630-201ENSMUST00000187806 498 ntBASIC14.58□□□□□ -0.08
Cpsf2O35218 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.58□□□□□ -0.08
Cpsf2O35218 Shd-206ENSMUST00000225145 998 ntBASIC14.58□□□□□ -0.08
Cpsf2O35218 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cpsf2O35218 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cpsf2O35218 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cpsf2O35218 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf2O35218 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf2O35218 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf2O35218 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf2O35218 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf2O35218 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cpsf2O35218 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf2O35218 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.58□□□□□ -0.08
Cpsf2O35218 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf2O35218 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cpsf2O35218 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf2O35218 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.57□□□□□ -0.08
Cpsf2O35218 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpsf2O35218 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cpsf2O35218 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cpsf2O35218 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.57□□□□□ -0.08
Cpsf2O35218 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.57□□□□□ -0.08
Cpsf2O35218 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.57□□□□□ -0.08
Cpsf2O35218 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Gm33320-201ENSMUST00000192232 530 ntBASIC14.57□□□□□ -0.08
Cpsf2O35218 Gm2213-201ENSMUST00000197485 688 ntBASIC14.57□□□□□ -0.08
Cpsf2O35218 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.57□□□□□ -0.08
Cpsf2O35218 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cpsf2O35218 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cpsf2O35218 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cpsf2O35218 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cpsf2O35218 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf2O35218 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms