Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.69□□□□□ -0.38
Hps1O08983 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.69□□□□□ -0.38
Hps1O08983 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hps1O08983 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.69□□□□□ -0.38
Hps1O08983 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hps1O08983 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hps1O08983 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hps1O08983 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hps1O08983 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hps1O08983 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hps1O08983 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hps1O08983 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hps1O08983 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.68□□□□□ -0.38
Hps1O08983 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Hps1O08983 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hps1O08983 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.68□□□□□ -0.38
Hps1O08983 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Hps1O08983 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.68□□□□□ -0.38
Hps1O08983 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.68□□□□□ -0.38
Hps1O08983 Mir7684-201ENSMUST00000183858 60 ntBASIC12.68□□□□□ -0.38
Hps1O08983 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.68□□□□□ -0.38
Hps1O08983 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Hps1O08983 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Hps1O08983 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Hps1O08983 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hps1O08983 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hps1O08983 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.67□□□□□ -0.38
Hps1O08983 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Hps1O08983 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.67□□□□□ -0.38
Hps1O08983 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Hps1O08983 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.67□□□□□ -0.38
Hps1O08983 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Gm9385-201ENSMUST00000117563 472 ntBASIC12.67□□□□□ -0.38
Hps1O08983 Gm16198-201ENSMUST00000118766 670 ntBASIC12.67□□□□□ -0.38
Hps1O08983 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.67□□□□□ -0.38
Hps1O08983 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.67□□□□□ -0.38
Hps1O08983 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.67□□□□□ -0.38
Hps1O08983 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Hps1O08983 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.67□□□□□ -0.38
Hps1O08983 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hps1O08983 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hps1O08983 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hps1O08983 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hps1O08983 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Hps1O08983 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hps1O08983 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hps1O08983 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hps1O08983 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hps1O08983 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hps1O08983 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hps1O08983 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hps1O08983 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hps1O08983 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hps1O08983 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hps1O08983 Gm11543-201ENSMUST00000120758 370 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms