Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm3139J3QK78 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm3139J3QK78 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Gm3139J3QK78 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm3139J3QK78 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm3139J3QK78 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Gm3139J3QK78 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm3139J3QK78 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm3139J3QK78 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Gm3139J3QK78 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Gm3139J3QK78 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.54□□□□□ -0.24
Gm3139J3QK78 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.54□□□□□ -0.24
Gm3139J3QK78 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.54□□□□□ -0.24
Gm3139J3QK78 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.54□□□□□ -0.24
Gm3139J3QK78 Gm18187-201ENSMUST00000196476 984 ntBASIC13.54□□□□□ -0.24
Gm3139J3QK78 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Gm5035-201ENSMUST00000215581 927 ntBASIC13.54□□□□□ -0.24
Gm3139J3QK78 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.54□□□□□ -0.24
Gm3139J3QK78 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3139J3QK78 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.53□□□□□ -0.24
Gm3139J3QK78 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.53□□□□□ -0.24
Gm3139J3QK78 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.53□□□□□ -0.24
Gm3139J3QK78 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.53□□□□□ -0.24
Gm3139J3QK78 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Gm3139J3QK78 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.53□□□□□ -0.24
Gm3139J3QK78 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3139J3QK78 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Gm3139J3QK78 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm3139J3QK78 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm3139J3QK78 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm3139J3QK78 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Gm3139J3QK78 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Gm3139J3QK78 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.52□□□□□ -0.24
Gm3139J3QK78 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm3139J3QK78 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm3139J3QK78 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
Gm3139J3QK78 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Gm3139J3QK78 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm3139J3QK78 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm3139J3QK78 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm3139J3QK78 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.52□□□□□ -0.25
Gm3139J3QK78 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm3139J3QK78 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gm3139J3QK78 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.52□□□□□ -0.25
Gm3139J3QK78 Gm29608-201ENSMUST00000190444 463 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms