Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Gm4607-201ENSMUST00000206649 577 ntBASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Gm9062-201ENSMUST00000117712 727 ntBASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Gm6335-201ENSMUST00000118081 1194 ntBASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Gm7816-201ENSMUST00000119884 1194 ntBASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Gm15542-201ENSMUST00000121585 1194 ntBASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Gm18893-201ENSMUST00000198416 943 ntBASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Gm10752-201ENSMUST00000218348 729 ntBASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85cE9Q6B2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Gm8856-201ENSMUST00000185254 1144 ntBASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 AC154276.3-201ENSMUST00000227643 998 ntBASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Gm4366-201ENSMUST00000201488 1342 ntBASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc85cE9Q6B2 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Gm3096-201ENSMUST00000185770 364 ntBASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Gm8885-201ENSMUST00000189382 598 ntBASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 AC123665.1-201ENSMUST00000228204 438 ntBASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85cE9Q6B2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms