Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Gm27839-201ENSMUST00000184242 106 ntBASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Gm29741-201ENSMUST00000192667 421 ntBASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh17E9PXF0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Gm12485-201ENSMUST00000119641 291 ntBASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh17E9PXF0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms