Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Gm6415-201ENSMUST00000118488 348 ntBASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm28043E0CXC2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Gm25948-201ENSMUST00000175334 112 ntBASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Gm27631-201ENSMUST00000184163 466 ntBASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Gm28630-201ENSMUST00000187806 498 ntBASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Gm45453-201ENSMUST00000211758 853 ntBASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 BC001981-202ENSMUST00000191393 1545 ntBASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm28043E0CXC2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.66□□□□□ -0.22
Gm28043E0CXC2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms