Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Gm43474-201ENSMUST00000196415 774 ntBASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Gm44335-201ENSMUST00000196879 141 ntBASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Gm44297-201ENSMUST00000198304 141 ntBASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Gm44346-201ENSMUST00000198851 141 ntBASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Gm8927-201ENSMUST00000181978 981 ntBASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Gm3222-201ENSMUST00000071282 990 ntBASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Syt7-205ENSMUST00000224135 1557 ntBASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav12-1A0N8R1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Gm13385-201ENSMUST00000121089 220 ntBASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Gm4804-201ENSMUST00000182234 999 ntBASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms