Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm38002-201ENSMUST00000193255 180 ntBASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm19309-201ENSMUST00000218295 205 ntBASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm10268-201ENSMUST00000085340 555 ntBASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm3854A0A1B0GSS6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm3854A0A1B0GSS6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm3854A0A1B0GSS6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm3854A0A1B0GSS6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm3854A0A1B0GSS6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.58□□□□□ -0.23
Gm3854A0A1B0GSS6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm3854A0A1B0GSS6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Gm14723-201ENSMUST00000118686 215 ntBASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm3854A0A1B0GSS6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Gm27516-201ENSMUST00000184237 98 ntBASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Gm37922-201ENSMUST00000195596 455 ntBASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm3854A0A1B0GSS6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms