Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Gm2308-201ENSMUST00000166539 1004 ntBASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Gm4535-201ENSMUST00000182274 558 ntBASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Gm4691-201ENSMUST00000182339 1000 ntBASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Gm2451-201ENSMUST00000199447 999 ntBASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Gm10290-201ENSMUST00000200451 999 ntBASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Gm13830-205ENSMUST00000201195 1155 ntBASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Gm10355-201ENSMUST00000097146 517 ntBASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav8-1A0A075B641 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Gm45242-201ENSMUST00000210666 2129 ntBASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Gm43463-201ENSMUST00000195967 1803 ntBASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Gm11780-201ENSMUST00000136880 516 ntBASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Gm5253-201ENSMUST00000187104 1025 ntBASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Gm37153-201ENSMUST00000193637 231 ntBASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Gm33142-201ENSMUST00000193913 867 ntBASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 AC160338.1-201ENSMUST00000214232 705 ntBASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Gm7787-201ENSMUST00000216858 688 ntBASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 AC154471.1-201ENSMUST00000224418 436 ntBASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms