Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.47□□□□□ -0.73
PdfS4R2K0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.47□□□□□ -0.73
PdfS4R2K0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.47□□□□□ -0.73
PdfS4R2K0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Mir1895-201ENSMUST00000122615 79 ntBASIC10.47□□□□□ -0.73
PdfS4R2K0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.47□□□□□ -0.73
PdfS4R2K0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.47□□□□□ -0.73
PdfS4R2K0 Olfr286-202ENSMUST00000205305 969 ntBASIC10.47□□□□□ -0.73
PdfS4R2K0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
PdfS4R2K0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.47□□□□□ -0.73
PdfS4R2K0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
PdfS4R2K0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.47□□□□□ -0.73
PdfS4R2K0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
PdfS4R2K0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PdfS4R2K0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.73
PdfS4R2K0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
PdfS4R2K0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
PdfS4R2K0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
PdfS4R2K0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.46□□□□□ -0.73
PdfS4R2K0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
PdfS4R2K0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
PdfS4R2K0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.46□□□□□ -0.73
PdfS4R2K0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.46□□□□□ -0.73
PdfS4R2K0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
PdfS4R2K0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC10.46□□□□□ -0.73
PdfS4R2K0 Gm18041-201ENSMUST00000218210 618 ntBASIC10.46□□□□□ -0.73
PdfS4R2K0 Thap2-203ENSMUST00000218989 527 ntBASIC10.46□□□□□ -0.73
PdfS4R2K0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PdfS4R2K0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC10.46□□□□□ -0.74
PdfS4R2K0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
PdfS4R2K0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.46□□□□□ -0.74
PdfS4R2K0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.46□□□□□ -0.74
PdfS4R2K0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
PdfS4R2K0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
PdfS4R2K0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PdfS4R2K0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms