Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm15770-201ENSMUST00000117498 584 ntBASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Atp6ap1Q9R1Q9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Syt7-205ENSMUST00000224135 1557 ntBASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm22189-201ENSMUST00000103822 86 ntBASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm42612-201ENSMUST00000197986 623 ntBASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm43170-201ENSMUST00000199827 612 ntBASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm6218-201ENSMUST00000219812 628 ntBASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Atp6ap1Q9R1Q9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Atp6ap1Q9R1Q9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Atp6ap1Q9R1Q9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Atp6ap1Q9R1Q9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Gm27437-201ENSMUST00000183429 107 ntBASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Gm5279-201ENSMUST00000199575 745 ntBASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms