Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Gm13597-201ENSMUST00000121239 375 ntBASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Gm11452-201ENSMUST00000122376 690 ntBASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim42Q9D2H5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Gm15483-201ENSMUST00000120338 456 ntBASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Gm27920-201ENSMUST00000183953 96 ntBASIC13.65□□□□□ -0.22
Trim42Q9D2H5 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.65□□□□□ -0.22
Trim42Q9D2H5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim42Q9D2H5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim42Q9D2H5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Gm5177-201ENSMUST00000183092 997 ntBASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms