Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Gm18889-201ENSMUST00000174284 929 ntBASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Gm27494-201ENSMUST00000184735 189 ntBASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Gm18766-201ENSMUST00000189811 808 ntBASIC14.04□□□□□ -0.16
Snf8Q9CZ28 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Gm6916-202ENSMUST00000205523 195 ntBASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Dupd1-202ENSMUST00000224735 548 ntBASIC14.04□□□□□ -0.16
Snf8Q9CZ28 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Snf8Q9CZ28 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Gm25287-201ENSMUST00000103846 110 ntBASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Gm22918-201ENSMUST00000103855 110 ntBASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.03□□□□□ -0.16
Snf8Q9CZ28 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms