Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Mir6990-201ENSMUST00000183724 91 ntBASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 AA619741-201ENSMUST00000195095 646 ntBASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Gm2213-201ENSMUST00000197485 688 ntBASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Mir125a-201ENSMUST00000083545 68 ntBASIC14.84□□□□□ -0.03
Ssr1Q9CY50 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.84□□□□□ -0.03
Ssr1Q9CY50 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssr1Q9CY50 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ssr1Q9CY50 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Ssr1Q9CY50 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Ssr1Q9CY50 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Ssr1Q9CY50 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ssr1Q9CY50 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ssr1Q9CY50 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ssr1Q9CY50 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ssr1Q9CY50 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Gm24513-201ENSMUST00000174964 138 ntBASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Gm27631-201ENSMUST00000184163 466 ntBASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Gm27397-201ENSMUST00000184997 107 ntBASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssr1Q9CY50 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms