Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Gm11779-201ENSMUST00000118541 368 ntBASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Gm16026-204ENSMUST00000162652 683 ntBASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smurf1Q9CUN6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Gm11594-201ENSMUST00000122313 162 ntBASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Thap2-203ENSMUST00000218989 527 ntBASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smurf1Q9CUN6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smurf1Q9CUN6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smurf1Q9CUN6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smurf1Q9CUN6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Smurf1Q9CUN6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Gm16198-201ENSMUST00000118766 670 ntBASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Gm5479-201ENSMUST00000160578 435 ntBASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Gm6736-201ENSMUST00000166583 948 ntBASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smurf1Q9CUN6 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms