Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Gm13296-201ENSMUST00000117854 997 ntBASIC15.05■□□□□ 0
Pcdh15Q99PJ1 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.05■□□□□ 0
Pcdh15Q99PJ1 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15.05■□□□□ 0
Pcdh15Q99PJ1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pcdh15Q99PJ1 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC15.05■□□□□ 0
Pcdh15Q99PJ1 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.05■□□□□ 0
Pcdh15Q99PJ1 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh15Q99PJ1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh15Q99PJ1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh15Q99PJ1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC15.05■□□□□ 0
Pcdh15Q99PJ1 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh15Q99PJ1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh15Q99PJ1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh15Q99PJ1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Gm5369-201ENSMUST00000217499 588 ntBASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdh15Q99PJ1 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Gm24845-201ENSMUST00000158034 109 ntBASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Gm19353-201ENSMUST00000184561 445 ntBASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Gm23363-201ENSMUST00000175024 79 ntBASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh15Q99PJ1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Gm9540-201ENSMUST00000188230 478 ntBASIC15.03■□□□□ -0
Pcdh15Q99PJ1 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh15Q99PJ1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh15Q99PJ1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh15Q99PJ1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh15Q99PJ1 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Pcdh15Q99PJ1 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh15Q99PJ1 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC15.02■□□□□ -0
Pcdh15Q99PJ1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh15Q99PJ1 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Pcdh15Q99PJ1 Gm44651-201ENSMUST00000207343 372 ntBASIC15.02■□□□□ -0
Pcdh15Q99PJ1 Gm7207-201ENSMUST00000211575 1067 ntBASIC15.02■□□□□ -0
Pcdh15Q99PJ1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.02■□□□□ -0
Pcdh15Q99PJ1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms