Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4Q99P72 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4Q99P72 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Gm6027-201ENSMUST00000121467 756 ntBASIC17.73■□□□□ 0.43
Rtn4Q99P72 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Gm3436-201ENSMUST00000179930 840 ntBASIC17.73■□□□□ 0.43
Rtn4Q99P72 Gm24694-201ENSMUST00000180054 110 ntBASIC17.73■□□□□ 0.43
Rtn4Q99P72 Gm27663-201ENSMUST00000184839 110 ntBASIC17.73■□□□□ 0.43
Rtn4Q99P72 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC17.73■□□□□ 0.43
Rtn4Q99P72 AC153529.1-201ENSMUST00000217818 370 ntBASIC17.73■□□□□ 0.43
Rtn4Q99P72 Gm9229-201ENSMUST00000222777 126 ntBASIC17.73■□□□□ 0.43
Rtn4Q99P72 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.73■□□□□ 0.43
Rtn4Q99P72 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.73■□□□□ 0.43
Rtn4Q99P72 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4Q99P72 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Carlr-201ENSMUST00000181515 2574 ntBASIC17.72■□□□□ 0.43
Rtn4Q99P72 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.72■□□□□ 0.43
Rtn4Q99P72 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Gm29755-201ENSMUST00000196976 948 ntBASIC17.72■□□□□ 0.43
Rtn4Q99P72 Gm6916-202ENSMUST00000205523 195 ntBASIC17.72■□□□□ 0.43
Rtn4Q99P72 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Gm4803-201ENSMUST00000218729 1279 ntBASIC17.72■□□□□ 0.43
Rtn4Q99P72 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4Q99P72 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rtn4Q99P72 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4Q99P72 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4Q99P72 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4Q99P72 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4Q99P72 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4Q99P72 Gm23984-201ENSMUST00000157139 203 ntBASIC17.71■□□□□ 0.43
Rtn4Q99P72 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rtn4Q99P72 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rtn4Q99P72 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.71■□□□□ 0.43
Rtn4Q99P72 Gm42612-201ENSMUST00000197986 623 ntBASIC17.71■□□□□ 0.43
Rtn4Q99P72 Gm43170-201ENSMUST00000199827 612 ntBASIC17.71■□□□□ 0.43
Rtn4Q99P72 Gm42696-201ENSMUST00000199859 1142 ntBASIC17.71■□□□□ 0.43
Rtn4Q99P72 Gm43761-201ENSMUST00000202132 991 ntBASIC17.71■□□□□ 0.43
Rtn4Q99P72 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.71■□□□□ 0.43
Rtn4Q99P72 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4Q99P72 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rtn4Q99P72 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4Q99P72 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4Q99P72 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.71■□□□□ 0.43
Rtn4Q99P72 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4Q99P72 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms