Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Gm16379-201ENSMUST00000161469 348 ntBASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Gm8762-201ENSMUST00000193486 339 ntBASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col25a1Q99MQ5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Gm26927-201ENSMUST00000182385 965 ntBASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Gm44126-201ENSMUST00000204831 514 ntBASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col25a1Q99MQ5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col25a1Q99MQ5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col25a1Q99MQ5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col25a1Q99MQ5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.08□□□□□ -0.15
Col25a1Q99MQ5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.08□□□□□ -0.15
Col25a1Q99MQ5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col25a1Q99MQ5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col25a1Q99MQ5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col25a1Q99MQ5 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col25a1Q99MQ5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col25a1Q99MQ5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col25a1Q99MQ5 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col25a1Q99MQ5 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col25a1Q99MQ5 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col25a1Q99MQ5 Gm16479-201ENSMUST00000121706 932 ntBASIC14.08□□□□□ -0.16
Col25a1Q99MQ5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col25a1Q99MQ5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col25a1Q99MQ5 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.08□□□□□ -0.16
Col25a1Q99MQ5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms